COVID-19 (coronavirus disease 2019) is a new viral infection disease that is widely spread worldwide. 198 (Elsevier, Amsterdam, 1998). }\delta (1-\delta )(2-\delta )(3-\delta ) U_{i}(t-3) + P.R\bigotimes S_i. where \(ni_{j}\) is the importance of node j, while \(w_{j}\) refers to the weighted number of samples reaches the node j, also \(C_{j}\) determines the impurity value of node j. left(j) and right(j) are the child nodes from the left split and the right split on node j, respectively. These datasets contain hundreds of frontal view X-rays and considered the largest public resource for COVID-19 image data. TOKYO, Jan 26 (Reuters) - Japan is set to downgrade its classification of COVID-19 to that of a less serious disease on May 8, revising its measures against the coronavirus such as relaxing. Mutation: A mutation refers to a single change in a virus's genome (genetic code).Mutations happen frequently, but only sometimes change the characteristics of the virus. In our experiment, we randomly split the data into 70%, 10%, and 20% for training, validation, and testing sets, respectively. 25, 3340 (2015). They were manually aggregated from various web based repositories into a machine learning (ML) friendly format with accompanying data loader code. layers is to extract features from input images. Authors While55 used different CNN structures. Nguyen, L.D., Lin, D., Lin, Z. https://doi.org/10.1016/j.future.2020.03.055 (2020). arXiv preprint arXiv:2004.07054 (2020). ), such as \(5\times 5\), \(3 \times 3\), \(1 \times 1\). J. As seen in Table1, we keep the last concatenation layer which contains the extracted features, so we removed the top layers such as the Flatten, Drop out and the Dense layers which the later performs classification (named as FC layer). 41, 923 (2019). I am passionate about leveraging the power of data to solve real-world problems. However, using medical imaging, chest CT, and chest X-ray scan can play a critical role in COVID-19 diagnosis. Marine memory: This is the main feature of the marine predators and it helps in catching the optimal solution very fast and avoid local solutions. Isolation and characterization of a bat sars-like coronavirus that uses the ace2 receptor. One of the main disadvantages of our approach is that its built basically within two different environments. Coronavirus disease (Covid-19) is an infectious disease that attacks the respiratory area caused by the severe acute . They also used the SVM to classify lung CT images. Google Scholar. We adopt a special type of CNN called a pre-trained model where the network is previously trained on the ImageNet dataset, which contains millions of variety of images (animal, plants, transports, objects,..) on 1000 classe categories. Softw. Furthermore, deep learning using CNN is considered one of the best choices in medical imaging applications20, especially classification. 69, 4661 (2014). Classification of COVID19 using Chest X-ray Images in Keras 4.6 33 ratings Share Offered By In this Guided Project, you will: Learn to Build and Train the Convolutional Neural Network using Keras with Tensorflow as Backend Learn to Visualize Data in Matplotlib Learn to make use of the Trained Model to Predict on a New Set of Data 2 hours In Dataset 2, FO-MPA also is reported as the highest classification accuracy with the best and mean measures followed by the BPSO. \(Fit_i\) denotes a fitness function value. The \(\delta\) symbol refers to the derivative order coefficient. Eng. Stage 2: The prey/predator in this stage begin exploiting the best location that detects for their foods. Both datasets shared some characteristics regarding the collecting sources. A.T.S. Then, applying the FO-MPA to select the relevant features from the images. M.A.E. According to the promising results of the proposed model, that combines CNN as a feature extractor and FO-MPA as a feature selector could be useful and might be successful in being applied in other image classification tasks. For the exploration stage, the weibull distribution has been applied rather than Brownian to bost the performance of the predator in stage 2 and the prey velocity in stage 1 based on the following formula: Where k, and \(\zeta\) are the scale and shape parameters. Article Figure6 shows a comparison between our FO-MPA approach and other CNN architectures. The results showed that the proposed approach showed better performances in both classification accuracy and the number of extracted features that positively affect resource consumption and storage efficiency. and JavaScript. PubMedGoogle Scholar. Currently, we witness the severe spread of the pandemic of the new Corona virus, COVID-19, which causes dangerous symptoms to humans and animals, its complications may lead to death. In Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 19 (2015). (14)-(15) are implemented in the first half of the agents that represent the exploitation. According to the formula10, the initial locations of the prey and predator can be defined as below: where the Elite matrix refers to the fittest predators. In such a case, in order to get the advantage of the power of CNN and also, transfer learning can be applied to minimize the computational costs21,22. In54, AlexNet pre-trained network was used to extract deep features then applied PCA to select the best features by eliminating highly correlated features. Extensive evaluation experiments had been carried out with a collection of two public X-ray images datasets. They concluded that the hybrid method outperformed original fuzzy c-means, and it had less sensitive to noises. Regarding the consuming time as in Fig. The memory terms of the prey are updated at the end of each iteration based on first in first out concept. For each decision tree, node importance is calculated using Gini importance, Eq. Zhang, N., Ruan, S., Lebonvallet, S., Liao, Q. In transfer learning, a CNN which was previously trained on a large & diverse image dataset can be applied to perform a specific classification task by23. used a dark Covid-19 network for multiple classification experiments on Covid-19 with an accuracy of 87% [ 23 ]. PVT-COV19D: COVID-19 Detection Through Medical Image Classification Based on Pyramid Vision Transformer. Correspondence to There are three main parameters for pooling, Filter size, Stride, and Max pool. The whale optimization algorithm. <span> <h5>Background</h5> <p>The COVID19 pandemic has precipitated global apprehensions about increased fatalities and raised concerns about gaps in healthcare . They were also collected frontal and lateral view imagery and metadata such as the time since first symptoms, intensive care unit (ICU) status, survival status, intubation status, or hospital location. The memory properties of Fc calculus makes it applicable to the fields that required non-locality and memory effect. 121, 103792 (2020). Toaar, M., Ergen, B. The Weibull Distribution is a heavy-tied distribution which presented as in Fig. 35, 1831 (2017). On the second dataset, dataset 2 (Fig. COVID-19 image classification using deep features and fractional-order marine predators algorithm, $$\begin{aligned} \chi ^2=\sum _{k=1}^{n} \frac{(O_k - E_k)^2}{E_k} \end{aligned}$$, $$\begin{aligned} ni_{j}=w_{j}C_{j}-w_{left(j)}C_{left(j)}-w_{right(j)}C_{right(j)} \end{aligned}$$, $$\begin{aligned} fi_{i}=\frac{\sum _{j:node \mathbf \ {j} \ splits \ on \ feature \ i}ni_{j}}{\sum _{{k}\in all \ nodes }ni_{k}} \end{aligned}$$, $$\begin{aligned} normfi_{i}=\frac{fi_{i}}{\sum _{{j}\in all \ nodes }fi_{j}} \end{aligned}$$, $$\begin{aligned} REfi_{i}=\frac{\sum _{j \in all trees} normfi_{ij}}{T} \end{aligned}$$, $$\begin{aligned} D^{\delta }(U(t))=\lim \limits _{h \rightarrow 0} \frac{1}{h^\delta } \sum _{k=0}^{\infty }(-1)^{k} \begin{pmatrix} \delta \\ k\end{pmatrix} U(t-kh), \end{aligned}$$, $$\begin{aligned} \begin{pmatrix} \delta \\ k \end{pmatrix}= \frac{\Gamma (\delta +1)}{\Gamma (k+1)\Gamma (\delta -k+1)}= \frac{\delta (\delta -1)(\delta -2)\ldots (\delta -k+1)}{k! The whole dataset contains around 200 COVID-19 positive images and 1675 negative COVID19 images. The symbol \(R_B\) refers to Brownian motion. Imag. Google Scholar. IEEE Trans. (2) calculated two child nodes. \(\Gamma (t)\) indicates gamma function. MPA simulates the main aim for most creatures that is searching for their foods, where a predator contiguously searches for food as well as the prey. Credit: NIAID-RML Biol. IRBM https://doi.org/10.1016/j.irbm.2019.10.006 (2019). A survey on deep learning in medical image analysis. However, the proposed FO-MPA approach has an advantage in performance compared to other works. AMERICAN JOURNAL OF EMERGENCY MEDICINE COVID-19: Facemask use prevalence in international airports in Asia, Europe and the Americas, March 2020 The two datasets consist of X-ray COVID-19 images by international Cardiothoracic radiologist, researchers and others published on Kaggle. The different proposed models will be trained with three-class balanced dataset which consists of 3000 images, 1000 images for each class. After feature extraction, we applied FO-MPA to select the most significant features. 2022 May;144:105350. doi: 10.1016/j.compbiomed.2022.105350. For the special case of \(\delta = 1\), the definition of Eq. Article In Inception, there are different sizes scales convolutions (conv. The following stage was to apply Delta variants. As a result, the obtained outcomes outperformed previous works in terms of the models general performance measure. Zhang et al.16 proposed a kernel feature selection method to segment brain tumors from MRI images. Therefore, reducing the size of the feature from about 51 K as extracted by deep neural networks (Inception) to be 128.5 and 86 in dataset 1 and dataset 2, respectively, after applying FO-MPA algorithm while increasing the general performance can be considered as a good achievement as a machine learning goal. where \(R\in [0,1]\) is a random vector drawn from a uniform distribution and \(P=0.5\) is a constant number. Inceptions layer details and layer parameters of are given in Table1. In this paper, we proposed a novel COVID-19 X-ray classification approach, which combines a CNN as a sufficient tool to extract features from COVID-19 X-ray images. They used different images of lung nodules and breast to evaluate their FS methods. With accounting the first four previous events (\(m=4\)) from the memory data with derivative order \(\delta\), the position of prey can be modified as follow; Second: Adjusting \(R_B\) random parameter based on weibull distribution. The evaluation confirmed that FPA based FS enhanced classification accuracy. Abbas, A., Abdelsamea, M.M. & Gaber, M.M. Classification of covid-19 in chest x-ray images using detrac deep convolutional neural network. Dual feature selection and rebalancing strategy using metaheuristic optimization algorithms in x-ray image datasets. They employed partial differential equations for extracting texture features of medical images. The next process is to compute the performance of each solution using fitness value and determine which one is the best solution. 11314, 113142S (International Society for Optics and Photonics, 2020). Inception architecture is described in Fig. They used K-Nearest Neighbor (kNN) to classify x-ray images collected from Montgomery dataset, and it showed good performances. This dataset currently contains hundreds of frontal view X-rays and is the largest public resource for COVID-19 image and prognostic data, making it a necessary resource to develop and evaluate tools to aid in the treatment of CO VID-19. Artif. The combination of SA and GA showed better performances than the original SA and GA. Narayanan et al.33 proposed a fuzzy particle swarm optimization (PSO) as an FS method to enhance the classification of CT images of emphysema. Therefore in MPA, for the first third of the total iterations, i.e., \(\frac{1}{3}t_{max}\)). To segment brain tissues from MRI images, Kong et al.17 proposed an FS method using two methods, called a discriminative clustering method and the information theoretic discriminative segmentation. Table2 depicts the variation in morphology of the image, lighting, structure, black spaces, shape, and zoom level among the same dataset, as well as with the other dataset. Blog, G. Automl for large scale image classification and object detection. This dataset consists of 219 COVID-19 positive images and 1341 negative COVID-19 images. Introduction Highlights COVID-19 CT classification using chest tomography (CT) images. Eur. Can ai help in screening viral and covid-19 pneumonia? Lilang Zheng, Jiaxuan Fang, Xiaorun Tang, Hanzhang Li, Jiaxin Fan, Tianyi Wang, Rui Zhou, Zhaoyan Yan: PVT-COV19D: COVID-19 Detection Through Medical Image Classification Based on Pyramid Vision Transformer. Efficient classification of white blood cell leukemia with improved swarm optimization of deep features. In this subsection, the performance of the proposed COVID-19 classification approach is compared to other CNN architectures. Also, in58 a new CNN architecture called EfficientNet was proposed, where more blocks were added on top of the model after applying normalization of images pixels intensity to the range (0 to 1). Computed tomography (CT) and magnetic resonance imaging (MRI) represent valuable input to AI algorithms, scanning human body sections for the sake of diagnosis. It also contributes to minimizing resource consumption which consequently, reduces the processing time. Also, it has killed more than 376,000 (up to 2 June 2020) [Coronavirus disease (COVID-2019) situation reports: (https://www.who.int/emergencies/diseases/novel-coronavirus-2019/situation-reports/)]. This means we can use pre-trained model weights, leveraging all of the time and data it took for training the convolutional part, and just remove the FCN layer. Moreover, the Weibull distribution employed to modify the exploration function. In ancient India, according to Aelian, it was . An image segmentation approach based on fuzzy c-means and dynamic particle swarm optimization algorithm. In order to normalize the values between 0 and 1 by dividing by the sum of all feature importance values, as in Eq. The prey follows Weibull distribution during discovering the search space to detect potential locations of its food. The evaluation outcomes demonstrate that ABC enhanced precision, and also it reduced the size of the features. Provided by the Springer Nature SharedIt content-sharing initiative, Environmental Science and Pollution Research (2023), Archives of Computational Methods in Engineering (2023), Arabian Journal for Science and Engineering (2023). New Images of Novel Coronavirus SARS-CoV-2 Now Available NIAID Now | February 13, 2020 This scanning electron microscope image shows SARS-CoV-2 (yellow)also known as 2019-nCoV, the virus that causes COVID-19isolated from a patient in the U.S., emerging from the surface of cells (blue/pink) cultured in the lab. Table4 show classification accuracy of FO-MPA compared to other feature selection algorithms, where the best, mean, and STD for classification accuracy were calculated for each one, besides time consumption and the number of selected features (SF). Abadi, M. et al. It is also noted that both datasets contain a small number of positive COVID-19 images, and up to our knowledge, there is no other sufficient available published dataset for COVID-19. Whereas, the worst algorithm was BPSO. Although outbreaks of SARS and MERS had confirmed human to human transmission3, they had not the same spread speed and infection power of the new coronavirus (COVID-19). Stage 2 has been executed in the second third of the total number of iterations when \(\frac{1}{3}t_{max}< t< \frac{2}{3}t_{max}\). Deep cnns for microscopic image classification by exploiting transfer learning and feature concatenation. By achieving 98.7%, 98.2% and 99.6%, 99% of classification accuracy and F-Score for dataset 1 and dataset 2, respectively, the proposed approach outperforms several CNNs and all recent works on COVID-19 images. The largest features were selected by SMA and SGA, respectively. D.Y. (22) can be written as follows: By using the discrete form of GL definition of Eq. Feature selection based on gaussian mixture model clustering for the classification of pulmonary nodules based on computed tomography. Four measures for the proposed method and the compared algorithms are listed. (33)), showed that FO-MPA also achieved the best value of the fitness function compared to others. Liao, S. & Chung, A. C. Feature based nonrigid brain mr image registration with symmetric alpha stable filters. Fung, G. & Stoeckel, J. Svm feature selection for classification of spect images of alzheimers disease using spatial information. One from the well-know definitions of FC is the Grunwald-Letnikov (GL), which can be mathematically formulated as below40: where \(D^{\delta }(U(t))\) refers to the GL fractional derivative of order \(\delta\). where \(R_L\) has random numbers that follow Lvy distribution. Adv. In this paper, we used two different datasets. COVID-19 image classification using deep learning: Advances, challenges and opportunities COVID-19 image classification using deep learning: Advances, challenges and opportunities Comput Biol Med. Thank you for visiting nature.com. Cite this article. Eng. Sci. A combination of fractional-order and marine predators algorithm (FO-MPA) is considered an integration among a robust tool in mathematics named fractional-order calculus (FO). Havaei, M. et al. https://doi.org/10.1155/2018/3052852 (2018). Diagnosis of parkinsons disease with a hybrid feature selection algorithm based on a discrete artificial bee colony. All authors discussed the results and wrote the manuscript together. SharifRazavian, A., Azizpour, H., Sullivan, J. Objective: Lung image classification-assisted diagnosis has a large application market. A. Pool layers are used mainly to reduce the inputs size, which accelerates the computation as well. Inf. The evaluation showed that the RDFS improved SVM robustness against reconstruction kernel and slice thickness. For example, Lambin et al.7 proposed an efficient approach called Radiomics to extract medical image features. implemented the deep neural networks and classification as well as prepared the related figures and manuscript text. One of the drawbacks of pre-trained models, such as Inception, is that its architecture required large memory requirements as well as storage capacity (92 M.B), which makes deployment exhausting and a tiresome task. All classication models ever, the virus mutates, and new variants emerge and dis- performed better in classifying the Non-COVID-19 images appear. For Dataset 2, FO-MPA showed acceptable (not the best) performance, as it achieved slightly similar results to the first and second ranked algorithm (i.e., MPA and SMA) on mean, best, max, and STD measures. Afzali, A., Mofrad, F.B. PubMed Central ADS Yousri, D. & Mirjalili, S. Fractional-order cuckoo search algorithm for parameter identification of the fractional-order chaotic, chaotic with noise and hyper-chaotic financial systems. where \(fi_{i}\) represents the importance of feature I, while \(ni_{j}\) refers to the importance of node j. Deep residual learning for image recognition. The proposed segmentation method is capable of dealing with the problem of diffuse lung borders in CXR images of patients with COVID-19 severe or critical. JMIR Formative Research - Classifying COVID-19 Patients From Chest X-ray Images Using Hybrid Machine Learning Techniques: Development and Evaluation Published on 28.2.2023 in Vol 7 (2023) Preprints (earlier versions) of this paper are available at https://preprints.jmir.org/preprint/42324, first published August 31, 2022 . Using X-ray images we can train a machine learning classifier to detect COVID-19 using Keras and TensorFlow. In the meantime, to ensure continued support, we are displaying the site without styles The family of coronaviruses is considered serious pathogens for people because they infect respiratory, hepatic, gastrointestinal, and neurologic diseases. Classification of COVID-19 X-ray images with Keras and its potential problem | by Yiwen Lai | Analytics Vidhya | Medium Write Sign up 500 Apologies, but something went wrong on our end.. Bukhari, S. U.K., Bukhari, S. S.K., Syed, A. contributed to preparing results and the final figures. EMRes-50 model . Deep-learning artificial intelligent (AI) methods have the potential to help improve diagnostic efficiency and accuracy for reading portable CXRs. Chong et al.8 proposed an FS model, called Robustness-Driven FS (RDFS) to select futures from lung CT images to classify the patterns of fibrotic interstitial lung diseases. Test the proposed Inception Fractional-order Marine Predators Algorithm (IFM) approach on two publicity available datasets contain a number of positive negative chest X-ray scan images of COVID-19. It is calculated between each feature for all classes, as in Eq. Med. Whereas the worst one was SMA algorithm. The main contributions of this study are elaborated as follows: Propose an efficient hybrid classification approach for COVID-19 using a combination of CNN and an improved swarm-based feature selection algorithm. Chollet, F. Xception: Deep learning with depthwise separable convolutions. ISSN 2045-2322 (online). 2 (left). Meanwhile, the prey moves effectively based on its memory for the previous events to catch its food, as presented in Eq. Finally, the predator follows the levy flight distribution to exploit its prey location. Furthermore, the proposed GRAY+GRAY_HE+GRAY_CLAHE image representation was evaluated on two different datasets, SARS-CoV-2 CT-Scan and New_Data_CoV2, where it was found to be superior to RGB .
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